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View Structure Prediction Details

Protein: CE36135
Organism: Caenorhabditis elegans
Length: 531 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36135.

Description E-value Query
Range
Subject
Range
gi|114657936 - gi|114657936|ref|XP_001175096.1| PREDICTED: hypothetical protein isoform 11 [Pan troglodytes]
649.0 [0..7] [530..63]

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Predicted Domain #1
Region A:
Residues: [1-531]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDDSFQKEL EASGYDKQEQ KLAAVPATTH MEHLCRLDIR EAPHLVRQTG IICTIGPACA  60
   61 SVEMLQKLIL NGMNIARLNF SHGSHEYHAG TIANVREAAD SFSDKRVIGI ALDTKGPEIR 120
  121 TGLLAGGASA EIELARGASI RLTTDPHFSE SGTAVNLFVD YKNIAKVLSV GSRVYIDDGL 180
  181 ISLIVEELQT DAVICSVENG GMLGSRKGVN LPGTIVDLPA VSEKDCKDLQ FGVEQGVDII 240
  241 FASFIRNAEG IRTIRKVLGE KGKKIKIIAK IENQEGVDNA DEIISESDGV MVARGDLGIE 300
  301 IPAEKVFLAQ KMLISKCNRA GKPVICATQM LESMVHKPRP TRAEGSDVAN AVLDGADCVM 360
  361 LSGETAKGEY PVDALKIMHY ICKEAEAAVY HRRLFDELLQ NTQKPTDMSH TIAIAATSAA 420
  421 ASCHASAILL ITTTGRSAIQ CSRYKPAVPI LTISRDVAVC RQLHLYRGVF PVHYPAERAA 480
  481 DWPTDVDNRI NHAIAIGKDR GFIHKGDFLV VVTGWRQGAG ATNTLRIITA E

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1zjhA
Description: Structure of human muscle pyruvate kinase (PKM2)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle