| Protein: | ser-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 455 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ser-2.
| Description | E-value | Query Range |
Subject Range |
|
|
256.0 | [0..12] | [455..1] |
|
Region A: Residues: [1-348] |
1 11 21 31 41 51
| | | | | |
1 MFRNYTDSVQ EMVLRAIDSI RDSVINASSA VSTTTLPPLD IPMTSMKPPS IIPTVELVLG 60
61 TITYLVIIAM TVVGNTLVVV AVFSYRPLKK VQNYFLVSLA ASDLAVAIFV MPLHVVTFLA 120
121 GGKWLLGVTV CQFFTTADIL LCTSSILNLC AIALDRYWAI HNPINYAQKR TTKFVCIVIV 180
181 IVWILSMLIS VPPIIGWNNW QENMMEDSCG LSTEKAFVVF SAAGSFFLPL LVMVVVYVKI 240
241 FISARQRIRT NRGRSALMRI QNAEGDDDYR KMSIKRASVE SARTSSRVGE KTPLVIADGQ 300
301 TTVTTLAAHS TDGGSLPKDE TTKHMKYHNN GSCKVKVKDV KEDEGNPN
|
| Detection Method: |  |
| Confidence: | 34.154902 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [349-455] |
1 11 21 31 41 51
| | | | | |
1 PTAVLRKREK ISVAKEKRAA KTIAVIIFVF SFCWLPFFVA YVIRPFCETC KLHAKVEQAF 60
61 TWLGYINSSL NPFLYGILNL EFRRAFKKIL CPKAVLEQRR RRMSAQP
|
| Detection Method: | |
| Confidence: | 5.42 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
