| Protein: | ser-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 429 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ser-2.
| Description | E-value | Query Range |
Subject Range |
|
|
277.0 | [0..35] | [356..5] |
|
Region A: Residues: [1-324] |
1 11 21 31 41 51
| | | | | |
1 MNDDFSQEMV LRAIDSIRDS VINASSAVST TTLPPLDIPM TSMKPPSIIP TVELVLGTIT 60
61 YLVIIAMTVV GNTLVVVAVF SYRPLKKVQN YFLVSLAASD LAVAIFVMPL HVVTFLAGGK 120
121 WLLGVTVCQF FTTADILLCT SSILNLCAIA LDRYWAIHNP INYAQKRTTK FVCIVIVIVW 180
181 ILSMLISVPP IIGWNNWQEN MMEDSCGLST EKAFVVFSAA GSFFLPLLVM VVVYVKIFIS 240
241 ARQRIRTNRG RSALMRIQNA EGDDDYRKMS IKRASVESAR TSSRTDGGSL PKDETTKHMK 300
301 YHNNGSCKVK VKDVKEDEGN PNPT
|
| Detection Method: |  |
| Confidence: | 38.522879 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [325-429] |
1 11 21 31 41 51
| | | | | |
1 AVLRKREKIS VAKEKRAAKT IAVIIFVFSF CWLPFFVAYV IRPFCETCKL HAKVEQAFTW 60
61 LGYINSSLNP FLYGILNLEF RRAFKKILCP KAVLEQRRRR MSAQP
|
| Detection Method: | |
| Confidence: | 5.33 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
