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View Structure Prediction Details

Protein: CE36079
Organism: Caenorhabditis elegans
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36079.

Description E-value Query
Range
Subject
Range
gi|11359779 - gi|11359779|pir||T45037 hypothetical protein Y39B6B.k [imported] - Caenorhabditis elegans
197.0 [0..1] [322..772]

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Predicted Domain #1
Region A:
Residues: [1-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVGSVIMAV ITTVTQDQIP QLIDAVNVTI GGHGVERRFG DGEIYLLFSV FAAISSMAIF  60
   61 TFMLMPSQDV SNCIEPSDKV VSFKDGMKLM AETLKSSKMF KLAPTFLLTG MYTAFWVSIY 120
  121 PTSLTFNMHN SKMIYLPAIY GFGVGVGETI MGIIISTLSK RIKDFGLKPT MLIGSVLTTV 180
  181 FCFVALLSTP FDATVTPSHE QPLLFQPSQV TVFLIAIIGG MSDCCLCSVR SVICALAMPK 240
  241 RRAQAFSVSK IYQSLGSCFI FFLSPFLNLY HYVIGIPLLC VLSCILFFRQ ARQTQVMERK 300
  301 LTQELEESEK RRMAKELEAQ MQKI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.48
Match: 2v8nA
Description: No description for 2v8nA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle