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View Structure Prediction Details

Protein: CE36059
Organism: Caenorhabditis elegans
Length: 344 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36059.

Description E-value Query
Range
Subject
Range
gi|60468186 - gi|60468186|gb|EAL66196.1| hypothetical protein DDB0204910 [Dictyostelium discoideum]
gi|66812030, gi|... - gi|66812030|ref|XP_640194.1| hypothetical protein [Dictyostelium discoideum AX4], gi|60468186|gb|EAL...
140.0 [0..7] [317..213]

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Predicted Domain #1
Region A:
Residues: [1-71]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSENDSKF KYFGILLLTI QQASMPLMAR YSRAREDSNV FFTTVNVFMM EIIKVVVCSA  60
   61 IMIYTTKSVM K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [72-171]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YINELKLAIF EHRSETLKVC IPALIYTLQN NLYYIALSHL EATTFCISYQ MKIFTTAIFM  60
   61 YFFLGKKLST KQWWALVLLV LGVADIQYVY SPPPASEDVE 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.27
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [172-344]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QNPMYGFMAV LTMCFTSAFA GVYLEKVLKS SNASIWVQNI RLALIGLPIS FLSMWYYDWE  60
   61 KINEQGAFRG WDFVVVCLTV TNSVGGILIS VVIKYADNIL KAYAQSMAII GAAVGSWILF 120
  121 DFAPGFMFLL GTFMVIVSII IYTAFPYQEP ESKLSAYLKS QQNSSLLMIK PEK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle