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View Structure Prediction Details

Protein: CE36054
Organism: Caenorhabditis elegans
Length: 634 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36054.

Description E-value Query
Range
Subject
Range
gi|111614819, gi... - gi|121610377|ref|YP_998184.1| gamma-glutamyltransferase [Verminephrobacter eiseniae EF01-2], gi|1215...
433.0 [0..250] [633..34]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPRKLRHRP SDELIDIRER GLPWLFSVFV VLFLLLTILL FYFIFTTRDV YLSQKQALEE  60
   61 EDIKKKEVAA HTKQESEEDD ETWKEHTRRK GKGKSAEEKV HVDPTTIPST TTSSTT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [117-246]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TTTTTTTTEE PTTTTSPIAT TTTSTSTTTT ETPTTSEATT HEPTASTELP PPDAPNDYID  60
   61 SEEAQNISAS QESGETTDVL LELEDDNIED VQVEEYEETT KSPTVSTSTS EPMAAAPITD 120
  121 APKTENVSRN 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.26
Match: 2j63A
Description: No description for 2j63A was found.

Predicted Domain #3
Region A:
Residues: [247-634]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YTRIIWDRRT VRSSSEKFSK FAIISHHEDC SEIGKKIHET GGNAVDAMVA TEFCISAVHP  60
   61 HTTGPGFGAV IVLHSKKKNG TFVIDGRERA PKNANKNTFV INPTIAHIGY SSMGVPGWIS 120
  121 VLWTAYKQFG SGKIVWKSLI EPTIELLKTN RVRIDRLLGQ AFESRRNHIL HEKSFDNWLS 180
  181 QATREGAVLR NEQYEDFLKL LKESVHAEHD FYGGQFVKII VEEMKSRGGL ISRQDLESYS 240
  241 CIVTRAETLS IGDHFLVGPH LPYHFPILGK VFQNITESFP SNPEYILEYY VDFVKLLQKA 300
  301 NIMKHFVGDD LFEPEVKPKI DEWTTPVQFK AEEQVEQNQS KKKPISFSRV QSSDEEGNSV 360
  361 NFMSTNNVPF PNSLWIILGY TLNQLTKY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 115.0
Match: 2e0wA
Description: No description for 2e0wA was found.

Predicted functions:

Term Confidence Notes
catalytic activity 0.6665721924779 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle