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View Structure Prediction Details

Protein: glb-32
Organism: Caenorhabditis elegans
Length: 230 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for glb-32.

Description E-value Query
Range
Subject
Range
gi|27574231 - gi|27574231|pdb|1O1J|A Chain A, Deoxy Hemoglobin (A-Gly-C:v1m,L29f,H58q; B,D:v1m,L106w)
185.0 [0..1] [230..66]

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Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHAHSSSSN GSSQITANPH DEKTKEKVEK LFRQNNRTNR SRSLDNRTQE KLPNRPVGSS  60
   61 HSARFPKTRH IPVPLQGPRK SEEGPNGSIS GLSRDDKRII ETCWFKCSQK QLRKCSCDMF 120
  121 WDILHTDEDI LRLFRLDHVA PNRLKDNDYF KSHASNLALV LNLVVTNLQD NFDQAQDALQ 180
  181 ALGYQHLHLI DRTHFQTMYW DIFTDCFERN PPPSFKKGAE REVALKFHRF 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.154902
Match: 1o1jA
Description: Hemoglobin, alpha-chain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle