| Protein: | srh-41 |
| Organism: | Caenorhabditis elegans |
| Length: | 345 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srh-41.
| Description | E-value | Query Range |
Subject Range |
|
|
184.0 | [0..2] | [331..144] |
|
Region A: Residues: [1-345] |
1 11 21 31 41 51
| | | | | |
1 MSISNQSCKP PTYLASTDFL ETGCHIGSVF MLTSSIYTLF LMAKKSPDTM KSSVPYMINL 60
61 HVATMICDLT WAVIVLPMFF MPVIAAHASG ILTWVTRERN VILWPPFAVL GGMAACLITL 120
121 FEHRHQAIVT RSWFVMKRKW TRRIIYPLFY AISINFGLVE LLTIPEDQAH AKQKAFKQHP 180
181 CLPPIFFDDT SAVIQRDASL FNPHMYTCCF ILSVLVCFYC LHVLWHLLPR NNPSMSSGTR 240
241 KMLRNFFISM CVQVTIPIVV LLLPNLYWNI SISFDYYSQE LNNISIILFT LHGTSSSIAV 300
301 IFIYKPYRVY TKKLIFYKIL KLPEPRPVTI VASVSDRSGG RTAPA
|
| Detection Method: |  |
| Confidence: | 45.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
