| Protein: | srh-45 |
| Organism: | Caenorhabditis elegans |
| Length: | 354 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srh-45.
| Description | E-value | Query Range |
Subject Range |
|
|
221.0 | [0..2] | [352..133] |
|
Region A: Residues: [1-354] |
1 11 21 31 41 51
| | | | | |
1 MATATIPELE AYYYSHYLLK CTRTYSFFET EQFLEISSYA LFFLTTPINF LGIYCIIFKT 60
61 PNEMLPIKWC MLYLHLLATF SSLCLTGVMM PYVFIPACAG FTVGLLPYLG VSTQLQGYIG 120
121 IGCLGMLALS LPILFENRQR YLVNSFKITR PISRIIFYGF NVLFVPISLF GVFAIFPEQQ 180
181 SARQAILRTL PCPTETYFTH SVFVLSLNHT PIITYLCALS IVAVVQILFF GGHSLTYLKT 240
241 DARKLSVATR QLQKRFFLVI CIQLVLPCII LFIPVVYFIY SMLSGYYNQA LNNISFVTIT 300
301 LYGATATITM IFLHKPYKKF VFSSFPSCQS RTNVVKPREW VRRNAVSVTT PVSF
|
| Detection Method: |  |
| Confidence: | 51.09691 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
