| Protein: | CE36000 |
| Organism: | Caenorhabditis elegans |
| Length: | 315 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE36000.
| Description | E-value | Query Range |
Subject Range |
|
|
142.0 | [0..22] | [295..100] |
|
Region A: Residues: [1-207] |
1 11 21 31 41 51
| | | | | |
1 MLERVKASTS RISSATRSPC FQRWSPVLLI LLTTVFILFG ATCFYLFERD PHEMTVRKWY 60
61 MNLAVERRQF ARTISSRIFN DTRNLLIIID REQTERVQQL LVESLKRYED KLTIVPPSRR 120
121 EWSWISSFNF AYSLLLTIGG GFKVPATVGS QIFAVFYCLI GIPLFYSTLI LIVCRLVSPV 180
181 LKWPSLTRSR RFLLILAAFG LFILWAI
|
| Detection Method: |  |
| Confidence: | 25.69897 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [208-315] |
1 11 21 31 41 51
| | | | | |
1 LIGLCLYYQV INDFWLSILH AFTGSLTVQI PSPAQITTCG ILFLNFAATI SVSLLILILL 60
61 VSFSVFFPKE MLIQEVDNGV EEKLERLTPP PKFQVIVDEA GESKLTSA
|
| Detection Method: | |
| Confidence: | 6.522879 |
| Match: | 1lnqA |
| Description: | Potassium channel-related protein MthK |
Matching Structure (courtesy of the PDB): |
|
