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View Structure Prediction Details

Protein: CE35917
Organism: Caenorhabditis elegans
Length: 397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35917.

Description E-value Query
Range
Subject
Range
COX10_MOUSE - Protoheme IX farnesyltransferase, mitochondrial OS=Mus musculus GN=Cox10 PE=2 SV=1
244.0 [0..2] [351..61]

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Predicted Domain #1
Region A:
Residues: [1-72]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSRHILMCS RVGFTPSTSQ AVFHTSAVNS VLPRAKPLDE EMPLASPKKP RPDTQILDLS  60
   61 GKRHKKDIDI IV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [73-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDQYLQQWYK METKNLAADY LALCKSKLSL FVASTATCGV LMAPVPVAAD SLIAATVGTF  60
   61 LLSSAANACN QLLEAPYDAQ MRRTQTRVLV VHRFSPLHAF TFAGVTGLTG IGLLAYYANP 120
  121 LAAALGALNW FIYAGVYTPM KRSHIGCTWA GAVVGAIPPL MGYAAATGYL DPAAWCLATI 180
  181 LFSW

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [257-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QFPHFNGLSW NLRGDYSKAG YRVMCVTNER LCRVTSLRHS VALLGLCSIA APLTDLTTLT  60
   61 FAIDSLPVNA YLVYLSYKFY KAPDAKNSRK LFFYSLLHLP LVMLLMGISN YGRNEQQKEH 120
  121 ISDRISNGYN KMVDSVKSFS L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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