| Protein: | cat-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 553 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cat-1.
| Description | E-value | Query Range |
Subject Range |
|
|
231.0 | [0..4] | [507..6] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MSYILDWIST YRNNRKILLL IVYIALFLDN MLLTTVVPII PEYLLRMEHP NETDILFSHN 60
61 SQKRVKRQWE DDDSWDVPLK LGNNADIDWD ENPIGPVGRS ERR
|
| Detection Method: |  |
| Confidence: | 1.06 |
| Match: | 2v8nA |
| Description: | No description for 2v8nA was found. |
|
Region A: Residues: [104-553] |
1 11 21 31 41 51
| | | | | |
1 KESDRKNHNS KNREYNDRRK YMSPAAKKPP VETEEPAVRT ISEEERHKLL ASENVHVGLM 60
61 FGSKALVQLL VNPWIGPLTN RIGYTMPMFG GFVIMFCSTI LFAFGDSYFT LWLARALQGV 120
121 GSACTSTSGM GMLAQAYPDD LERGSAMGIA LGGLALGVLV GPPYGGLLYQ WSGKELPFVL 180
181 LALLALFDGS IQFMVLQPKI DRGEPEGSSI KQLAKDPYII VAAGAITIGN LGIAMLEPSL 240
241 PLWMMESWGA NSLERGAAFL PASISYLIGT NIFGPLAHRI GRWLSSFIGL VVIGFSLLSI 300
301 PSATSVAGLI IPHALLGFSI GMIDASMFPL MGYLVDIRHV GVYGSIYAIA DAAFCFAFAL 360
361 GPFFSGPLVK SLGFPTMMYI IAVISFLYAP LMFLLKNPPV LIEPTPQTQS VELRQNGDSR 420
421 VTNENYERIE GMNIAGQLQQ NNMYSATSAF
|
| Detection Method: | |
| Confidence: | 33.0 |
| Match: | 1pw4A |
| Description: | Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.09176719149278 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 3.59744164024479 | bayes_pls_golite062009 |
| transmembrane transporter activity | 3.5865018981083 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 3.54194478414824 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 2.21266150105753 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 1.79369588808394 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 1.59419818573076 | bayes_pls_golite062009 |
| organic acid transmembrane transporter activity | 1.24937104052238 | bayes_pls_golite062009 |
| secondary active transmembrane transporter activity | 1.22264637452409 | bayes_pls_golite062009 |
| alcohol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| polyol transmembrane transporter activity | 0.924836669821548 | bayes_pls_golite062009 |
| binding | 0.818732184064642 | bayes_pls_golite062009 |
| glycerol transmembrane transporter activity | 0.812001619402678 | bayes_pls_golite062009 |
| symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| solute:cation symporter activity | 0.74591237387473 | bayes_pls_golite062009 |
| cation:sugar symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
| sugar:hydrogen symporter activity | 0.143419068761182 | bayes_pls_golite062009 |
