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View Structure Prediction Details

Protein: CE35778
Organism: Caenorhabditis elegans
Length: 429 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35778.

Description E-value Query
Range
Subject
Range
CE30721 - status:Partially_confirmed UniProt:O76677 protein_id:AAC27089.3
454.0 [0..1] [414..1]

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Predicted Domain #1
Region A:
Residues: [1-238]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSQDPVYSQ NDPLLVDSSN RSKKRDHWKS IAKIATVFIG ILFITSEVVG KNNENKHVPL  60
   61 LHRTHFKTQI KIIQLRPKPG QNSVKFTYDI IKNTYSHDND DGSQFRPFVA SNIERVVDKE 120
  121 NNETYLYPEY PLEFAHIHWV FNVEIPGKSV ENIMVQVPGM ENITRDEGEV YAKTCFNQLD 180
  181 FLPNKTGNII PMNKTLALDH NIDYVTMNII IHKPIKFLKT NAKESSGVTF SIEVYWKT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.30103
Match: 2g9gA
Description: No description for 2g9gA was found.

Predicted Domain #2
Region A:
Residues: [239-429]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VNFPTPVSSN TTTSEKFSTS SRSNDTELLR RSEELKEQSE YIQLQPESGQ NHVKFTYDII  60
   61 NNIYSHDNQD GSPVNPKQVF NIKRVVDEEN NEAYIGQEAP YRRSNIYWMF DLRNKGRNVE 120
  121 KVVVKMTGMD DITQHRAGTV ECCLNYLINC TGIPINESLT IEQNVGKLYI EVSEKKYCSH 180
  181 KSVLDCTSQP H

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 5.47
Match: 2g9gA
Description: No description for 2g9gA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle