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View Structure Prediction Details

Protein: CE35731
Organism: Caenorhabditis elegans
Length: 368 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35731.

Description E-value Query
Range
Subject
Range
CE37249 - status:Confirmed UniProt:Q400N3 protein_id:AAZ91346.1
420.0 [0..23] [368..9]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIDSFEDLD GVIQEIKFRL TRAPMEMGRE RECCVLSTSP GCRRAASFPF VGDSSIIQAS  60
   61 SLKVRSKSES EALNKMRL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [79-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TQMNLETVRK RLSESTIKEK DEGSDYQSHS SSSSECEVDD LELFCAGPLE LKEEEKLRKS  60
   61 VRFADDCGHE LYMVRVATEP SNCPPKLSP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [168-368]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SVLRRYRGES FEEEEMTTRE PAPVWNLMFK QPAADYVRFR ENMETNKVSL ENVILNNEAY  60
   61 KVMGTIKVGN IAFEKSVFVR YTMNGWISYM DKAAIYQPST SKIQDTFKFD LDLPSSVEKI 120
  121 HQIEFCICFK ANGTEYWDSN SGTNYVLHCE QQQHPAVPQQ RRASLFGSSK YLDRDDAYKL 180
  181 DYNDWGKFAS WKALSTDGPY W

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.69897
Match: 2eefA
Description: No description for 2eefA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle