| Protein: | twk-28 |
| Organism: | Caenorhabditis elegans |
| Length: | 523 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for twk-28.
| Description | E-value | Query Range |
Subject Range |
|
|
245.0 | [0..1] | [523..1] |
|
Region A: Residues: [1-437] |
1 11 21 31 41 51
| | | | | |
1 MYTHNAVDTF DMGSADSSLS SLNEIPMEMD LTSAGPPISD DETEVETKEK KLFVYAKRIL 60
61 PHVGLVILLF LYLIAGAFLF RYLEAPKELE TRNHELTTIL GLRDEFQDHI WNITQDSDNR 120
121 ISREAFNAIN QEYFEQLVKN MFQAYRNQFI TAKHLLNKTR EDEVLWTFPN SMFFAATVIT 180
181 TIGYGNLVPI TVTGRVACII FALLGIPLLL VTIADIGKFL SEFLSYLYRS YRGFKRKLRR 240
241 QSKKITSQYR SQSQSRSSSV MGSSKAGSMN LHDIDSDSED SAGDELRIPV FMVLLVLLAY 300
301 TAIGGFLFQS WEHLEYFEAF YFCFITMATV GFGDIVPNEQ VYVFFTMAYI IFGLSLATMC 360
361 IDLAGTEYIR KIHYLGTKME DAKGAVMTGL QAGEHLLKHT GIEVIKTAGG KLVQVRGAVL 420
421 SSKEARELGM SYLLQFN
|
| Detection Method: |  |
| Confidence: | 45.522879 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [438-523] |
1 11 21 31 41 51
| | | | | |
1 YQHKNVLYEP LTGNLAKVVK EANIKILPDD ITEKDGYIVQ NKSYDRPVLG ERGFVRLNGN 60
61 AIKRIMIPLR NQAICVPYLI QKESDV
|
| Detection Method: | |
| Confidence: | 13.69897 |
| Match: | 2q0aA |
| Description: | No description for 2q0aA was found. |
