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View Structure Prediction Details

Protein: xol-1
Organism: Caenorhabditis elegans
Length: 123 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for xol-1.

Description E-value Query
Range
Subject
Range
xol-1 - status:Partially_confirmed UniProt:Q23229 protein_id:AAQ91910.1
257.0 [0..1] [118..1]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQVEANSERR VKILGIDRSE NSPVLTYMET EDDPNFRNSK LAAAPHTVHM MDSGFLAINR  60
   61 QCLVKGKAIL AREPKSSNEH MIDDLPKHAH DQHTLSILRD FIDQLKLHNV YEINFYDPAI 120
  121 KKY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.522879
Match: 1mg7A
Description: Early switch protein XOL-1, N-terminal domain; Early switch protein XOL-1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.348396152404562 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle