| Protein: | twk-8 |
| Organism: | Caenorhabditis elegans |
| Length: | 755 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for twk-8.
| Description | E-value | Query Range |
Subject Range |
|
|
327.0 | [0..1] | [754..1] |
|
Region A: Residues: [1-423] |
1 11 21 31 41 51
| | | | | |
1 MPVLLRAVGF GRSSNTNRNL RPSSGASGDR LRRPSQMSAG AQSSATRHSQ GDKDKVVQSR 60
61 IHDQEPEVKE PETWGNRFHR MYKEYHIKYL FPLIFIMFYM LIGAIIFYLL ESGTAEDAAN 120
121 EEDYKYKRER RLLLLRMEEL VQDTASRRRA YRKKALEEAI DNYEQKLDFA VKNESQWTFM 180
181 SAMYFAGTLF TTIGYGDIAC ITSAGRIATV IYSCVGIPFM LITLNDLGKF LYNNINGCVK 240
241 GFEDFTTYLG AFRLCNRRGN GNFQKGDELV TLEAGTTGTT DAPEVSSLAS ELGSERNESD 300
301 YEDIEDEEER SMPRMSVKVA LGITVGWIFF CSALFKLWED WSYGQSCYFM FISLSTIGLG 360
361 DVSVQRRDMM VLCFVFVIVG LSLVSMTINV IQVALEDFYV NLIMKLILDY QEKMAAGGDQ 420
421 MGA
|
| Detection Method: |  |
| Confidence: | 57.69897 |
| Match: | 2a79B |
| Description: | Mammalian Shaker Kv1.2 potassium channel- beta subunit complex |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [424-607] |
1 11 21 31 41 51
| | | | | |
1 SVGMMRMWGN NKTAKLLMPL LSKEKKKIAM EKVEVKAKNN GIEVPAILTD LDEKSGMPKL 60
61 FHIEENTENE EPPKILEELV QKQIEIEEAA AENAVLFVAH DANTQTDILQ QEEKGHQTDE 120
121 KQYGEEAVQT EAMQSDNQEC ETQTEVVHNS IAETQTVIVD YSEADTMTQP VIVNESDMQT 180
181 DYVQ
|
| Detection Method: | |
| Confidence: | 5.69897 |
| Match: | 2qksA |
| Description: | No description for 2qksA was found. |
|
Region A: Residues: [608-755] |
1 11 21 31 41 51
| | | | | |
1 TKEEELQTYI DKNDMETLTE IETKNVRIQT PQPVIEQKCI QTEDLHEDRK SPSKMSSAKK 60
61 RLRRAFAGKS KPSRNSVEHP VMSDWKDVEE SETAPDEEEE EEIGSVESLH WDPVDGMHAE 120
121 KQLPVKKLKA MFDSPKGQRK LESRNKSE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
