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View Structure Prediction Details

Protein: CE35686
Organism: Caenorhabditis elegans
Length: 313 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35686.

Description E-value Query
Range
Subject
Range
gi|187023180, gi... - gi|39591423|emb|CAE73477.1| Hypothetical protein CBG20929 [Caenorhabditis briggsae], gi|187023180|em...
gi|157752930 - gi|157752930|ref|XP_001680177.1| Hypothetical protein CBG20929 [Caenorhabditis briggsae AF16]
433.0 [0..1] [313..1]

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Predicted Domain #1
Region A:
Residues: [1-313]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGWVPDEWSI DHDTLIDAGG YVQKLKLYPY FDAAHYVLTC LSVRHDLGPD AISFSRKHPF  60
   61 SCWLSCMLMS FAGSFLSCFL LGEPIISPLK QHADILLGSI VWYLVFYSPF DVVFRLATWF 120
  121 PVKLGLSVLK EVQRTHKIAA GVKHAVRIYP ESYLVQILVG VAKGAGSGVV KIVEQLARGT 180
  181 WHPTNHEILR PSFTTKACVI ASIVFTLERH SMYVTAPHDL VYLCVVGFFI YFKLASLCLS 240
  241 VHDVLMPIEN VLCAVFMGGI IDAFAKAVDA TKKAIHSNRV LSEEEILSKE REKVLKKKKL 300
  301 LAQMSNGTDK KNN

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 154.568636
Match: PF05197.4
Description: No description for PF05197.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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