YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE35674
Organism: Caenorhabditis elegans
Length: 725 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35674.

Description E-value Query
Range
Subject
Range
gi|66512450 - gi|66512450|ref|XP_396261.2| PREDICTED: similar to CG14516-PA, isoform A isoform 1 [Apis mellifera]
549.0 [0..12] [723..70]

Back

Predicted Domain #1
Region A:
Residues: [1-725]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIPWLLLYLF GIVTSDLHQL LSTRPLYSDD RLPPILKPLS YDLQLQLPLS EVSDPDVPLF  60
   61 TGRCVMHFEI NQQIGPESAF ISDSTSNRAR IKFDIIMLDH FENVSLVMNG HELEIFNVQL 120
  121 TDDSMELSVD QPVLFPGRYT LTIHRYKGLI GSAIYYRDAG EHAVFGSNLF PNRAPAVFPS 180
  181 YLASTEKVTF SITMVHPVGT LALTSGSNEG APRKIDENWQ MTTFSTTPSI TPSMLCFLLL 240
  241 PHEYTHIEST YTGVNISVHY NRFRVQKEQT KHLLHTATQV LALLKDIFSS LIPVPKIDII 300
  301 TMNEVSSTAC FGSIVVSEVQ FFSADYANQV KMLATWLAKQ WIGGYAAISE GSELCLQEDL 360
  361 VAFIADKVIK RMTNDEFTRL GHLAKIYLSE TIFTAGDTLK LDEHPNEFEI FEKCGLKGVA 420
  421 MLESIESLIG EKSMISKINE MIYNSKKGSY SSRTLYGLLN STVDEDIYVS QLLHYWHEHG 480
  481 GLPYMNVDRL ANSIKITQNG SNMTVKNGAG TWERMPLWPL PLKFTEFKLP IQIMVSHGIH 540
  541 LSPIRDGLIF SNLGFTNYYR VNYDIDTWRE IKTVLTENAT SYTLRERFQL VSDFCYFYSI 600
  601 KSLPEPAASV LRNEFVQLVR LRPTSFPICD AAIFQCVVTH EHTKPRHLDK STMVQLRRKV 660
  661 FDSFANSSEM ECRAGLAHDA LNDLCTKLYG ISCFFNFKEK VKYIQTPAHL VPRPRGRVVL 720
  721 LDNVD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 104.0
Match: 2gtqA
Description: No description for 2gtqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle