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View Structure Prediction Details

Protein: CE35635
Organism: Caenorhabditis elegans
Length: 220 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35635.

Description E-value Query
Range
Subject
Range
gi|71916302, gi|... - gi|72162570|ref|YP_290227.1| nicotinic acid mononucleotide adenylyltransferase [Thermobifida fusca Y...
189.0 [0..3] [219..15]

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Predicted Domain #1
Region A:
Residues: [1-220]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTEKVVILA VGSFNPPTNG HLCMMEDAKY SLEKSGKIVL EGIMSPVSDG YAKKSLISAK  60
   61 HRLAQTEAAT YDSDWIHASG WECAQSEWTA TVNVLKHHQQ DVKNKLGSDV NVLLLFGGDV 120
  121 IESFDKFYAD GTPVWDREDV EEIISAGIVV RSRPGSDPEQ TLKKLNLNEN SDKVHFIKNA 180
  181 ISSNSISSTS LRAALKEHRS IKYTTPDSVI KYIKDHRLYE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.045757
Match: 1gzuA
Description: Nicotinamide mononucleotide (NMN) adenylyltransferase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nicotinate-nucleotide adenylyltransferase activity 2.94996967804011 bayes_pls_golite062009
nicotinamide-nucleotide adenylyltransferase activity 2.8149071156304 bayes_pls_golite062009
ligase activity, forming carbon-oxygen bonds 2.54008423253828 bayes_pls_golite062009
ligase activity, forming aminoacyl-tRNA and related compounds 2.54008423253828 bayes_pls_golite062009
aminoacyl-tRNA ligase activity 2.52910114154477 bayes_pls_golite062009
catalytic activity 2.37674226834122 bayes_pls_golite062009
ligase activity 1.92894388839884 bayes_pls_golite062009
binding 1.11291710031577 bayes_pls_golite062009
adenylyltransferase activity 1.08055019963499 bayes_pls_golite062009
nucleic acid binding 0.623161608923414 bayes_pls_golite062009
nucleotidyltransferase activity 0.564359271862248 bayes_pls_golite062009
pantetheine-phosphate adenylyltransferase activity 0.454904507512502 bayes_pls_golite062009
pantoate-beta-alanine ligase activity 0.282286652169846 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle