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View Structure Prediction Details

Protein: CE35612
Organism: Caenorhabditis elegans
Length: 371 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35612.

Description E-value Query
Range
Subject
Range
gi|115653175, gi... - gi|115966411|ref|XP_001182776.1| PREDICTED: similar to GA13983-PA [Strongylocentrotus purpuratus], g...
152.0 [0..18] [321..54]

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Predicted Domain #1
Region A:
Residues: [1-206]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNDLRADSPN HDPLEDDFTL ALIDSVQRNP CVYNRYDPLH KVTDYKHEIW KLISIEIGYD  60
   61 GQPVELERKW KHMRDKYVRL RKQDKQKAPI KKTNKWYNYY HKMSFLDPYV EHRNRKRQKD 120
  121 YLNSNTPDFL DDDTAFLDGL SVKEMLKPES LLTSNDAGYN SPHTTSSSSS SGSNNNGRFL 180
  181 DSPTIDIEDD KKNLALIYDK FVANQT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [207-371]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ENEKNHRFSN KHGKDLLFST TNTLIEKLAT TSTAPSSSRK RKPIPVQILP SSPPPQEKNT  60
   61 KIELLEDILN EPNEDQVSLF VRSIARTLND LDREKFAMAR VEISKVLYKI EFGDNQYSEP 120
  121 VLIIKCVLFV REIQFSPFQE RTRQYFSKGH APAPKKIRPL SEIEA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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