| Protein: | srd-42 |
| Organism: | Caenorhabditis elegans |
| Length: | 320 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for srd-42.
| Description | E-value | Query Range |
Subject Range |
|
|
182.0 | [0..3] | [302..97] |
|
Region A: Residues: [1-320] |
1 11 21 31 41 51
| | | | | |
1 MFRAILSVFN PLVYVLSVCF QTTLIYTIIR HSPKNLSTLK IILLINCFSQ SIQSSMAFIT 60
61 QIRYVSNLVP LQLWSYGPCR HFEAFICYSM MHVLQTSSLI SGWTVFLTTF MKYQAAKHVV 120
121 LPKKNIWIVI CVIFAIISVS VACEIYLIII QALPQDIRKS YESINKNLEE YSVIGIMNYS 180
181 FLPSSINGVI VNGLVVVVPI SCLTLRRKIF KLLSGPNKSS DTLYLQNRIF LQGLTFQIFG 240
241 HILVYVPIYI CTFISFITKT EYTFSQFFIF VLPSLTTVVD PVITMYFVTP YRKKLLCWMR 300
301 SAQNKVFSAS GSTFAVSIIN
|
| Detection Method: |  |
| Confidence: | 39.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
