YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: irk-3
Organism: Caenorhabditis elegans
Length: 374 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for irk-3.

Description E-value Query
Range
Subject
Range
gi|73956285 - gi|73956285|ref|XP_546667.2| PREDICTED: similar to potassium inwardly-rectifying channel J12 [Canis ...
350.0 [0..18] [363..87]

Back

Predicted Domain #1
Region A:
Residues: [1-374]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLAEELERL SGENGAKKEL NGWRLSSSAP ELGVQRARLV SKDGKTLLNN IQIPERFRQA  60
   61 YKWRYCRNWF HLIIECNWRT ICILFLLGFI VSWTIFAVIY YVISRLKTVK KDESCIANVD 120
  121 TLISAFLFSM ESQHTIGYGL RYMTDLCPPA YLTLCVQCVV GVFLQTILAG IVIAKILRPK 180
  181 KRRQEMRFSR MAVIGPLDEH DKRPTLMIRL ADIQEKLFLA ESHVRLYMAC SKINSRGDRE 240
  241 LIGVKDMNVG YDSGWDRVLL LWPIIVRHVI NEDSPLYGMS RENIVKADFE LIMTVEGIVE 300
  301 ATGMTFQART SFLPDEILWG YKFKPMVLMN EKLSKYEVHY SFFDQTERVC DFDAQTIETE 360
  361 ETEDEHHHNA SGFL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 76.0
Match: 2qksA
Description: No description for 2qksA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle