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View Structure Prediction Details

Protein: ech-9
Organism: Caenorhabditis elegans
Length: 434 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ech-9.

Description E-value Query
Range
Subject
Range
gi|121604744, gi... - gi|84712671|ref|ZP_01020551.1| probable trifunctonal: enoyl-CoA hydratase and delta3-cis-delta2...
373.0 [0..2] [431..266]

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Predicted Domain #1
Region A:
Residues: [1-434]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKVPEEVRS YLMEAHSLAG QWSLPNDRGD HTNSEAYDVN SVAIIGGGTM GKAMAICFGL  60
   61 AGIETFLVVR NEQRCKQELE VMYAREKSFK RLNDKRIEKI NANLKITSDF HKLSNCDLIV 120
  121 ESVIEDMKLK KELFANLENI CKSTCIFGTN TSSLDLNEIS SVLRDPSNLV GIHFFNPANV 180
  181 IRLVEIIYGS HTSSQAIATA FQACESIKKL PVLVGNCKSF VFNRLLHVYF DQSQKLMYEY 240
  241 GYLPHQIDKI ITNFGFLMGP MTVADMNGFD VMEKLKKENG LEPNPIEKEM WRLKRYGRKT 300
  301 NKGFYKYDDK TQRKENDTEM EQIIRRVSQN AKSNIQIIND QDVINFMLYP TVNEGYRCIE 360
  361 EGVISNESLI DIMFILGFGW PIHSGGPMRF GKTEGLDKIA NMLVHWSSLE PKESAYIVAD 420
  421 ALKTANNKLM SSKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 96.69897
Match: 1zcjA
Description: Crystal structure of 3-hydroxyacyl-CoA dehydrogenase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle