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View Structure Prediction Details

Protein: ech-8
Organism: Caenorhabditis elegans
Length: 437 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ech-8.

Description E-value Query
Range
Subject
Range
gi|121604744, gi... - gi|84712671|ref|ZP_01020551.1| probable trifunctonal: enoyl-CoA hydratase and delta3-cis-delta2...
380.0 [0..2] [433..266]

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Predicted Domain #1
Region A:
Residues: [1-437]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKVPQAVRD YLMEAHQLAA QWSLPNDRGD YINSKSIPIK SVAVIGGGTM GRGIAIAFCL  60
   61 SGFETYLVEV NNKAAEFCKN ELEITYKREK AFRRLNDSKV EKLRKNLQIT TDFQKLNNCD 120
  121 LIVEAVFEDM KLKKELFTKL DKICKPSCIF GTNTSSLDLN EMSSVLRDPT KVVGIHFFNP 180
  181 ANLIRMVEVI YGSKTSSKAV ATAFEACRSI KKLPVLVGNC PAFVFNRLLG VYLNQSQKLM 240
  241 YEYGYLPHQI DKIITNFGFL MGPLTVADMN GLDVMEKLKK ENGWPASDFE KEVWRQKRYG 300
  301 RKTNKGYYKY DPNTHKKEND IEMEQLIRKF SSAASPNIQI LNDQDAVNFL LYPMVNEGLL 360
  361 CIEEGIIHHE SLIDIMFILG FGWPVATGGP MRFGWLQGIE KVASTIILWN SLEPNDRTYK 420
  421 VAATLQNVDR KNFAAKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 98.0
Match: 1zcjA
Description: Crystal structure of 3-hydroxyacyl-CoA dehydrogenase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle