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View Structure Prediction Details

Protein: mnm-2
Organism: Caenorhabditis elegans
Length: 249 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mnm-2.

Description E-value Query
Range
Subject
Range
gi|73947291 - gi|73947291|ref|XP_541354.2| PREDICTED: similar to Zinc finger protein 606 (Zinc finger protein 328)...
430.0 [0..2] [248..2529]

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Predicted Domain #1
Region A:
Residues: [1-249]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVEASRTCF LIDSLLNKKP KEELETEEED EEEDEEEELS SSEVTSENDM ETESASSSAS  60
   61 SVGQPKPDFS AFHKIFSNLD FAKLAAVKRN GHHQPMLFRP ECFFPLELSK HLHLVQQTFQ 120
  121 MNVLQNLGHT LPLPFVPMLK NVAPAQKRLN NKRASYVDHS QKGNLKKYRC DVCDKTFSRS 180
  181 NTLITHKRIH TGEKPFKCEH CGRAFRQPGN LTRHRLTHTT VKPYVCGLCD KAFNRASNLH 240
  241 THMRTHTNV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 58.221849
Match: 2i13A
Description: No description for 2i13A was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle