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View Structure Prediction Details

Protein: CE35239
Organism: Caenorhabditis elegans
Length: 392 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35239.

Description E-value Query
Range
Subject
Range
CE09553 - status:Partially_confirmed UniProt:O16719 protein_id:AAB66167.1
527.0 [0..1] [392..1]

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Predicted Domain #1
Region A:
Residues: [1-73]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNSMRGPLL FILGVTFSGF LFSLHYTRNK DYKDTVAIPR LAIQTEQLQE TTRIASRVIS  60
   61 TSSTKTPHVA TPP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [74-237]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PAAKVEPVDC NCISKTTGKS YNFCYTDPQN STSIGKKFDC ASLTILEKLN LVENPGPYVD  60
   61 LADSEKNSKN MVFVSAVSEN HFNEATHSIG SVYKFYHNAK FILYSLGLNK FYTQTIKKQF 120
  121 SNLEVRVFNT SGYPNYTNHW MEYRFKPLIL AEVMKDYENI WWMD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 115.431798
Match: PF07801.2
Description: No description for PF07801.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [238-392]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AHISVKKPGM IENLFKEISE NTKKSVTKVP ISIYYFIHSS HSNFATLFTD LLDYFPSNSI  60
   61 PLLKDPNLGG QMGANTMFFS RTEYTIQTFK WWILCALDKN CMNPPGAQVY CSFAIDDRNT 120
  121 KFANCFRFDQ SVINLLMLND FQDYKLYRSK IGSVF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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