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View Structure Prediction Details

Protein: CE35221
Organism: Caenorhabditis elegans
Length: 481 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35221.

Description E-value Query
Range
Subject
Range
CE16823 - status:Partially_confirmed UniProt:O76682 protein_id:AAC27095.1
502.0 [0..45] [480..195]

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Predicted Domain #1
Region A:
Residues: [1-102]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSQNAPFLY SQIDPLLLSR TNRPQPRDRW KTIIKITTTF IGVLMVTTPI VFGLSGVAGN  60
   61 TSHFKNISST TGKYPEKNST DFDTSTTTVS EANTTFDTTE SL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [103-277]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YLAEEITTQE KLIQLNPNSG HNYVKFTYDI LNNTYSHDNI DGSPVAPYFV DKIERVVDRK  60
   61 NNEAYLHQEF PDDFSNMYWA FSLKNDGKSV EKVVISIPGI EEIVNNRAGV VETCPNFLIN 120
  121 CFNIPVEKSL TIEQQMDKLY ISIMLQKDIK VLKTKLKGVS NVESFKIEVY WKNMT

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.522879
Match: 2g9gA
Description: No description for 2g9gA was found.

Predicted Domain #3
Region A:
Residues: [278-481]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSPTTTTPG SIATTKSSTT TITETHHQPD ISSTRLTEHQ DIIQLTPKSG QDYAKFTYDV  60
   61 ISNTYSQSNE DGSPVKPYLA SNVEHVVDRR LNVAYIHMKE PINKRIGLIN WEFDFRFPGR 120
  121 SVEKLEIKLT GMDEIVHNGG TANACLHDSF KCTAIPINGS LTIEKPQFNK FFMQIELFKD 180
  181 IKVFKTELND RSSAESISIV VYWS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.0
Match: 2g9fA
Description: No description for 2g9fA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle