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View Structure Prediction Details

Protein: CE35207
Organism: Caenorhabditis elegans
Length: 477 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35207.

Description E-value Query
Range
Subject
Range
gi|76629452 - gi|76629452|ref|XP_879632.1| PREDICTED: similar to solute carrier family 20 (phosphate transporter),...
365.0 [0..23] [477..21]

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Predicted Domain #1
Region A:
Residues: [1-222]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METTPVILSD ITTTISGVIG DFDQSSVLWA LIVGIILAFL LGNGMGANDV SNAFGTSVGS  60
   61 GVLTMVQAYI LASIFEALGS ILVGWSVADT MRKGVVDTSQ YADDPKELLL GQVAILGGCA 120
  121 AWLLIATVLH MPVSTTHSLV GATIGFSIVL RGLEGIQWMT IVRIVCSWFL SPILSGIISS 180
  181 IIYMIVDHTV LRTGDPLKNG LRALPVFYFV CMAFNALVVF WD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [223-306]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSKRFQELNQ ISKVCQLSIL GHYQFLGSKV QSTPSRFSDV ESANDSEKLK GLPEQKLQNV  60
   61 QQRKTPSGKI RKFYVWLLPD RTRV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [307-477]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DGRNITKLFS TIQVFTACFA GFAHGANDVS NAIAPLAAII SIYRTKSVEQ TESVPIYVLL  60
   61 YGVFAICVGL WLFGHYVIKT VGTNMSEINP ASGFTIEFGA AMTSLLASKV GLPLSTTHCL 120
  121 VGSVVAVGMI RSENGVKWSI FRDIAISWVV TLPVSGLISA GIMFVIKWAV L

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle