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View Structure Prediction Details

Protein: taf-8
Organism: Caenorhabditis elegans
Length: 497 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for taf-8.

Description E-value Query
Range
Subject
Range
taf-8 - status:Partially_confirmed UniProt:Q8WQ97 protein_id:CAD18882.1
703.0 [0..1] [497..1]

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Predicted Domain #1
Region A:
Residues: [1-149]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPQHNTFIR RPTIAGRSFH PSGYSVQQFV PQQSNFQQPI SNFTQKSAES RAQKQVGANF  60
   61 LPSIVNEAYH NVLEQIVTAM CYKSGFDDIE EGALETLMLL FHSYIKRIGE QSRFACEVAG 120
  121 RTIVTPGDVW FGLVNMGIKV NQLSDFHQD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.522879
Match: 1tafA
Description: TAF(II)42
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.581886805340955 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [150-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QIISALTVHA PEIIPPEAKN QALRIGTPRP HPSYVYEWLP PLPDP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [195-305]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HTYIKTEISE DIDFSYEKVR EAMSQKKRNG ITSLVNYMIR NYPSICLFRN FEEIIHEQVK  60
   61 KTFNKESEEK RMQEAFVAFR DLVQTNDIDE VKNVSKSLYD KGLISKHELQ S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [306-497]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTEVLCMSSD GALIDQFGER VYLSETTSID LEDKDRVSKS STRMTTCGDG AESLRYHWPI  60
   61 DEMLDELIEL DSCTMDLGDE KIDEMKYMQE KTTFEYLPEW CHILIPSFEH RAYLTVVSDD 120
  121 LKAEEESKKD KDKEKDKQIG DLTEEEKKGK DEEIFQTHEN LYLCPPIRDN DYGNYEDEEI 180
  181 TEESALEVPE ND

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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