YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CE35095
Organism: Caenorhabditis elegans
Length: 162 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35095.

Description E-value Query
Range
Subject
Range
gi|39584012, gi|... - gi|39584012|emb|CAE66418.1| Hypothetical protein CBG11686 [Caenorhabditis briggsae], gi|187030097|em...
gi|157773103 - gi|157773103|ref|XP_001664616.1| hypothetical protein CBG11686 [Caenorhabditis briggsae AF16]
242.0 [0..7] [135..15]

Back

Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEANNLKTY STEIANLINK LDITDVLTRD QMIGQGFEEV TAYSYKVGRL TMAMDHASLC  60
   61 TNNRCCRGFC FSIKRILKHY GECYHLDCME CHRFNMVVFE HSVFCGDSRT CKIPGCLSIA 120
  121 RANGRISDTA GEISRHLALA SCPSLAQKVL TWVRSWLNLG KS

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 4.25
Match: 1f81A
Description: CREB-binding transcriptional adaptor protein CBP (p300)
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle