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View Structure Prediction Details

Protein: grsp-1
Organism: Caenorhabditis elegans
Length: 193 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for grsp-1.

Description E-value Query
Range
Subject
Range
gi|21739272 - gi|21739272|emb|CAD38684.1| hypothetical protein [Homo sapiens]
194.0 [0..17] [191..1]

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Predicted Domain #1
Region A:
Residues: [1-193]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKLTILLLL TILGLATCQW GPGGWGGGPG RWGGWGGNRW GGGGGPGGWG NNGGGGWGRG  60
   61 GGRGGGDWGG NNGGGGNWGG NGGGRGDWGG NGGGGRGGGG RGDWGGNNNG GGGNWGGGGN 120
  121 NDGGWGGNNG GGGGGRGGGG RGGDGRGPPG SNGGGDWGGN GGGGRGGGGG RGGGGGGGAG 180
  181 ERIAEGVLGA LLG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.69
Match: 1wckA
Description: Crystal structure of the C-terminal domain of BclA, the major antigen of the exosporium of the Bacillus anthracis spore.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle