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View Structure Prediction Details

Protein: mig-14
Organism: Caenorhabditis elegans
Length: 549 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mig-14.

Description E-value Query
Range
Subject
Range
gi|73959857 - gi|73959857|ref|XP_853835.1| PREDICTED: similar to putative NFkB activating protein 373 isoform 1 is...
694.0 [0..3] [545..2]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGGAVIENL SNRKLFVIFA GLLVIQIMFF LIGAWYAPSP SSYMEFEMIT CRDETKGLSG  60
   61 EWIHRDNCQQ ISELSEYTPS SFDLREIVFI AKMPHT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [97-168]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RDGIELEYSP WFQFLLGVLH VDVEYSEHFK YVAHAPLELE VRMGYRDKES KKNEWKELVT  60
   61 SNVTRILECT IA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [169-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDEKKAGGTY DCDMLDLFEL GSSSYPFYLI NIRIPINQQA CQFDNKSANC QIGKLTGLRL  60
   61 IEIHQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [234-362]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGGFTLVWLW TKTFMTPVVA ICLWWYYNRI NQLARNPLLL ERAILLLGLS LVILDFPIEW  60
   61 ISLTYRIPFL LLISDLRQGL FYTVLFSFWL IFAGEHLIDD NTRNNLKSYR FNLSFIITAS 120
  121 LGLLIYDLI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [363-418]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERGIQLYDPF YSVWSSPTGS QIAYFAIFIS AISTVAYFIF LFFKIARVWS TIKSKR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [419-549]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SAQIYQTSEN RRLKVEGVIY RFKFLMLFTL LCSAFTIAAY FMKQYGEAQL HGDEARDGFL  60
   61 TGSTSAFFTG AFGMCNIYVL LLLAMYAPSH KHYRGASQLI DENDDDEIME DPSNQHTESN 120
  121 AMTTFLKPST D

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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