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View Structure Prediction Details

Protein: ttll-11
Organism: Caenorhabditis elegans
Length: 707 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ttll-11.

Description E-value Query
Range
Subject
Range
ttll-11 - status:Partially_confirmed UniProt:Q9N5L6 protein_id:AAL06035.1
578.0 [0..173] [707..1]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCKISTEFC SDNPVGSIST SKVHPTDLST PSYAIKPVEF YEEPLKDDQL FYKVALAKKE  60
   61 YREKEKDKKE QLSSNRRVSL QVEPNKLPIP LTRSSSLSSI MENRPPSGIS NSSFIRSRNT 120
  121 ASRRFTIDTS RAKSNQYVVS LCSKKIGIIE YPDGRSDKQP CDVYWHNVVL SDMNKIVTSP 180
  181 QSRVNKFP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [189-492]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GMTELAKKIS LTHSISSMQK LFPDEYAFYP NSWFLPAHLA DFHAFYRKAQ ALGKTEMWFI  60
   61 VKPDEGAQGT GIYLINSPNQ IRNVDQRQLV QEYVADPLLM NDKLKFDFRV YGVIKSINPL 120
  121 SIYVAREGMA RFCTEKYEKP DSSNFKNLYA HLTNYSLNKA NEAYVHSNTL QDQTRGSKRL 180
  181 LSTVFHQLES RGVKTKRLWH DIKLILVKTT LAMLPEIMLH YEHHFYDSTG PQCFQIMGFD 240
  241 VMIREDGTPI LLEVNAAPSL TADHIVPHPG RTLLEGGQRV RSIVDEVIKI PLVRDTLLLV 300
  301 LGLM

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.01
Match: 1z2nX
Description: Inositol 1,3,4-trisphosphate 5/6-kinase complexed Mg2+/ADP
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [493-707]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EEEYQNNSLK GETKSLDDMQ TIKQRRKPHL SEIFPTRYGA HSGHLLFLDK AMYIYMQFVQ  60
   61 LRSNVNITNA GLKQFVRKCN LIDIIPVVHV DAKVSEINYY FTGEKRTNGN GLPFHAFLMF 120
  121 LFFIAEKKFV LENDLLSKVQ RLLSFCDMSL RRYGVRSARL RRAEVDSTIG NVEIYMLPSR 180
  181 MARNRSGTNG RKQNFTDDNN NPNSFAHLPK INERL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle