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View Structure Prediction Details

Protein: CE34899
Organism: Caenorhabditis elegans
Length: 187 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34899.

Description E-value Query
Range
Subject
Range
gi|157772038 - gi|157772038|ref|XP_001677839.1| Hypothetical protein CBG07553 [Caenorhabditis briggsae AF16]
gi|39596579, gi|... - gi|39596579|emb|CAE63198.1| Hypothetical protein CBG07553 [Caenorhabditis briggsae], gi|187033332|em...
329.0 [0..1] [187..75]

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Predicted Domain #1
Region A:
Residues: [1-187]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSDDPFGIP EYADEAITID EPAINDRTFR HTMAKQANLF MVTLEDLKLA GNVVEETLKI  60
   61 DGQLKNIQLS EKLGIVRSEI NDMMKKTGSE PLDLSKLPPT YAAAFSFLAP ANEKVSHVTV 120
  121 DVNQLKATID DEIIAHLGAF AKDDVITENR LRLAVLVHDS CIQIVDKKKK KPLRMKIQAM 180
  181 TIEQDED

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle