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View Structure Prediction Details

Protein: CE34883
Organism: Caenorhabditis elegans
Length: 112 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34883.

Description E-value Query
Range
Subject
Range
gi|157762864 - gi|157762864|ref|XP_001673774.1| Hypothetical protein CBG23184 [Caenorhabditis briggsae AF16]
gi|39592013, gi|... - gi|39592013|emb|CAE75233.1| Hypothetical protein CBG23184 [Caenorhabditis briggsae], gi|187021218|em...
142.0 [0..1] [112..1]

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Predicted Domain #1
Region A:
Residues: [1-112]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPFGEKHARF GDSKSRMEDR SRVLTMKYGK HQMALIRKRM KVENWIETEV TKLFNGNETN  60
   61 NVDIDLDVIQ DIEDVTGKRK FAFEQLQKAH CPCSMDKIIM FLDELIIQLN TL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.0
Match: 1j2mA
Description: Myosin phosphatase inhibitor 17kDa protein, CPI-17
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle