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View Structure Prediction Details

Protein: CE34789
Organism: Caenorhabditis elegans
Length: 129 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34789.

Description E-value Query
Range
Subject
Range
gi|187038651, gi... - gi|39589173|emb|CAE57906.1| Hypothetical protein CBG00956 [Caenorhabditis briggsae], gi|187038651|em...
gi|157748945 - gi|157748945|ref|XP_001678186.1| Hypothetical protein CBG00956 [Caenorhabditis briggsae AF16]
173.0 [0..1] [129..1]

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Predicted Domain #1
Region A:
Residues: [1-129]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQLWSKIRY GVRWNPAERL ALATRALNLQ KVKSIDISLD PLHHDNLSIR TFWHSIMAPK  60
   61 VRLTNPNVRV KTDIRNDRRA PFFVATLDDG QKLHFSTENM TAMDVIMNFN RLTGQPELGK 120
  121 AGTRPRAKI

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.56
Match: 1s3aA
Description: NMR Solution Structure of Subunit B8 from Human NADH-Ubiquinone Oxidoreductase Complex I (CI-B8)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.116617745968569 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle