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View Structure Prediction Details

Protein: CE34743
Organism: Caenorhabditis elegans
Length: 342 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34743.

Description E-value Query
Range
Subject
Range
gi|157774617 - gi|157774617|ref|XP_001665374.1| hypothetical protein CBG10131 [Caenorhabditis briggsae AF16]
gi|187031569, gi... - gi|39590873|emb|CAE65247.1| Hypothetical protein CBG10131 [Caenorhabditis briggsae], gi|187031569|em...
301.0 [0..1] [342..1]

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Predicted Domain #1
Region A:
Residues: [1-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFHLLVLVS LVQFSQAENC PDCVNSGKVW CIETAQCGAT SCNTSINRPL NCPTNPQYGY  60
   61 DDEFMRSEIM VLATAAQNEN PQLCFDNQLP TMKLYQIRTV NCSTKYSDVT CVGYTAFDTK 120
  121 RKVISISFKG AHGQDQIEEM MEDGMKYGLL PYYTVTNGKI MKILQDYFML LWNEGMQQDL 180
  181 RHLKYKYPSY ELWVNGHSLG ASLAWAASAW IANIGLYKPD DMKVVVMGAP RIGDYNFADW 240
  241 HTKTFPYNFH ILHRSDPVAH QETYIPVTNS TLFYPKTEVW YNNYMRQGDP FQICQEADGH 300
  301 YCSGTLKPNA TQYIDHLYYF NIDLPGWGHA GCPMNISAFA QP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 49.522879
Match: 4tglA
Description: CATALYSIS AT THE INTERFACE: THE ANATOMY OF A CONFORMATIONAL CHANGE IN A TRIGLYCERIDE LIPASE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.866238607554457 bayes_pls_golite062009
hydrolase activity 0.52702612560045 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle