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View Structure Prediction Details

Protein: sgo-1
Organism: Caenorhabditis elegans
Length: 307 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for sgo-1.

Description E-value Query
Range
Subject
Range
gi|157758141 - gi|157758141|ref|XP_001671414.1| Hypothetical protein CBG17678 [Caenorhabditis briggsae AF16]
SGO1_CAEBR - Shugoshin OS=Caenorhabditis briggsae GN=sgo-1 PE=3 SV=1
499.0 [0..1] [307..1]

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Predicted Domain #1
Region A:
Residues: [1-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAKTAQSIF GGIVAAKKRP SKEVPEPTIN FKSANDSLVK KNLLLKQQVV QCTKTIEKLR  60
   61 NENVALRQKN QELIDGTLEQ RIELIVEQRL KFRLAHAAVL HKKLVQNIQQ TGLELDGLFK 120
  121 DLEPEPSGLN TRRPPKLELN LERVDEIPFC QSSMQGEIDE NEIRFDNNSS QSTSSIQNAV 180
  181 NGTPRKKQSV GKGRRSELFQ SFNADSSIVE EASTIPTNRR APMLIAPSST PAGPSKPTAR 240
  241 KPPTPRFKKP STPALAPQSD DTELSSTVRR QRSAKMNIKS LKEPSGKDKL RRPGKHDEPM 300
  301 PYINTFF

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle