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View Structure Prediction Details

Protein: CE34657
Organism: Caenorhabditis elegans
Length: 172 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34657.

Description E-value Query
Range
Subject
Range
gi|39593025, gi|... - gi|39593025|emb|CAE62639.1| Hypothetical protein CBG06772 [Caenorhabditis briggsae], gi|187034299|em...
120.0 [0..3] [171..4]

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Predicted Domain #1
Region A:
Residues: [1-172]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLLRWAFLL ASVSANLKIC DLPLDLGTTP TNGTKKELRY HFDPKLHIIL AFGYTGSVDD  60
   61 FRCAANSKSL GGHCQIEGVQ TYGDKYRFLR GIPAFDCGKN GVCLSSPYYN FCCDKRIEDK 120
  121 YNADFDPKCA RGTKVVKDGE SGYILRGKSC KSNFCPDGAT CMEGNYFATC CN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.39794
Match: 1bikA
Description: X-RAY STRUCTURE OF BIKUNIN FROM THE HUMAN INTER-ALPHA-INHIBITOR COMPLEX
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle