| Protein: | grd-9 |
| Organism: | Caenorhabditis elegans |
| Length: | 588 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for grd-9.
| Description | E-value | Query Range |
Subject Range |
|
|
310.0 | [0..317] | [573..190] |
|
Region A: Residues: [1-232] |
1 11 21 31 41 51
| | | | | |
1 MILPLLLSLF IFLPDVAEGN CHDHRYGVPS KSCKRVKDPT FQIRGDIRIV PMWEFILMKE 60
61 PSEKRVKRST SFRNGTLRSV HSGGNHGLPV DSLPTSNKNL NQANSFIKTP VLHQLLIQPI 120
121 DSSAPASPVQ RHIIQSQGKP TIGQLPIHVN KSKINTNHKT KRQGVYSALA QPPPAAKWGN 180
181 NRPSYQNPTP SYQQGYPQQF PAPQRQQQYQ PQPQTTNYNQ APQRPLYIPP PP
|
| Detection Method: |  |
| Confidence: | 6.221849 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [233-348] |
1 11 21 31 41 51
| | | | | |
1 PKLQVYPPQQ LAENPYQTRN GVNNYRSRNS YGTNNRKHGR NGKKGKSSKM CKMCRKLSEE 60
61 DESEEKEMAC DLCSKSRRKG KKKGKSLRDG MVGGRRKSSK SSEDSDDHDD SMEGEG
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [349-449] |
1 11 21 31 41 51
| | | | | |
1 GGTENFTNDD ENGADDYEDD GESTTIKPNA VSQPTILDFV ERSKQQNKLM RIPVYRGKKL 60
61 EAESNGTSGA YEDGDDNGEH NREEEEESSQ YSSNIRDMEQ P
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [450-588] |
1 11 21 31 41 51
| | | | | |
1 TKYSSKPNVK YSYPPKDTLP LQTCFHNPSG YVCCNLELNN VVESTYKEVR ELPNFNPCNL 60
61 QLIANKVQRA SERMFGHPFE SIVSHADFAQ NINFSGDLVC KLEIDGKYMI AYGTPYHADD 120
121 AVGPQGPDGK PLPVRSLKL
|
| Detection Method: | |
| Confidence: | 23.744727 |
| Match: | PF04155.9 |
| Description: | No description for PF04155.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
