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View Structure Prediction Details

Protein: ubc-8
Organism: Caenorhabditis elegans
Length: 221 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ubc-8.

Description E-value Query
Range
Subject
Range
gi|62738886 - gi|62738886|pdb|1Z2U|A Chain A, The 1.1a Crystallographic Structure Of Ubiquitin- Conjugating Enzyme...
189.0 [0..5] [151..2]

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Predicted Domain #1
Region A:
Residues: [1-221]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSATAIGKR RIDCDVVKLI SHNHEVQIVN GCSEFIVRFH GPKDTAYENG VWRIRVDMPD  60
   61 KYPFKSPSIG FLNKIFHPNI DEASGTVCLD VINQAWTALY DLTNIFDTFL PQLLTYPNAA 120
  121 DPLNGEAARL YIHKPEEYRR TCREYVMRFA SEHRAIEGCS PGNAYSISST PSEHYDGHPQ 180
  181 DDDDESCSSM SEFDESEVNF DDFDADDTMT ATKCKYLFSS I

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Detection Method: PSI-BLAST
Confidence: 37.0
Match: 2z5dA
Description: No description for 2z5dA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle