| Protein: | gei-4 |
| Organism: | Caenorhabditis elegans |
| Length: | 542 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gei-4.
| Description | E-value | Query Range |
Subject Range |
|
|
225.0 | [0..7] | [537..201] |
|
Region A: Residues: [1-340] |
1 11 21 31 41 51
| | | | | |
1 MQQNIQYTYS SDPRSGGNQN QQLHGISQFQ QNSYQPTTYS NSNANNFHSS NSATFIPNSV 60
61 TQTPQRRMGE EKSLVNMLDA YFIDSTTPST STSWNNQQPV QMSSIQQSVG SYNQQIPQLK 120
121 VGDVDLQVEG MNVKLSSSPD KGEKDRVKKA RQAEAARMRY HRLSNEEKRE LNLKRTLAQK 180
181 RKRQREKEME ELESILRETN DIQEDPDITE QLREKRMRAK WAEAARTRYA RMTPEERRAH 240
241 NTRRRMRQMQ NAMSAIKACG MATGDPQKDD EAVRLHIKTQ NAKKAEAARQ RYHRMNDDEK 300
301 RVYNQRRTEA FRRRRMEEEM LLAMPIGRIN GEALDRAQQI
|
| Detection Method: |  |
| Confidence: | 11.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [341-542] |
1 11 21 31 41 51
| | | | | |
1 VVRNAKRAEA ARLRYQRMTP DQRKSYNQKR YTPKRRRNEM DDMISAGQMA VGSSGTITMG 60
61 TGTPAKKDDM DALSSLERDV VKRTQHAQQI LLRQRANQSS GTPRSVTPPP QAYIISNGQQ 120
121 QHQQLVGNQG NNGIGQHQVL HQGHMQQQQI QVSHQDFQQS SQSIPQNIYT SGMIIQNQGQ 180
181 QQQGQQQQQG QSQQILNNPY RT
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 1c1gA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
|
