YRC Public Data Repository - Protein Structure Prediction

Protein:	unc-2
Organism:	Caenorhabditis elegans
Length:	286 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for unc-2.

Description	E-value	Query Range	Subject Range
unc-2 - status:Partially_confirmed UniProt:Q8MPY5 protein_id:AAM69092.1	530.0	[0..1]	[286..1641]

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Predicted Domain #1

Region A:
Residues: [1-182]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARASPPSPA ERYGHPPRYR TESPPSSRSE YQMSIRDPII RRNRYNTMEH SRSSHDPQYH  60
   61 QDQQQQQQPH HQQHSQHLQH SHHKTYQNHN QYSRSPIYSD DSSVAESYRR EREFRRYQDS 120
  121 TPQDVSEDDD PMPTAVRARR LPLISTMPTH YESAYQPSSY NQHLNDSYGL GTGYQRDYHT 180
  181 SH

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [183-286]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SHSHHPTSQQ QQHQPMYSTS PLISPRSSHS YYTPRSSQYY EIPSPSPDIY PSYRGSASPR  60
   61 RYPTSTVVVA PDREGSSARV IQAQPGSIPL SDSETEDDPR WAIV