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View Structure Prediction Details

Protein: CE34561
Organism: Caenorhabditis elegans
Length: 798 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34561.

Description E-value Query
Range
Subject
Range
gi|9802560 - gi|9802560|gb|AAF99762.1|AC003981_12 F22O13.20 [Arabidopsis thaliana]
550.0 [0..2] [798..867]

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Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPPPPPPHN KSSTMLRNPA KSVDVNRLRS DIEILSQQLE MVKARLESAL AEQDDIDEKG  60
   61 SKKMLSRDNS IDSRLSTSLF SSGSHDSCAA TPIPHPEQPI IPPRSNSNLS KFNKALSMST 120
  121 SHLTQEIEEI SNKRLSMALP SSSAAPFITS LKRRETFTKV DEITKEL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.154902
Match: 2acxA
Description: No description for 2acxA was found.

Predicted Domain #2
Region A:
Residues: [168-798]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NARIGKVKRT ESLSIGMNRH HAPVPPPKPL RTFQEQLRKP VDQLQTNTMG RFSNNQKFKS  60
   61 QTSSFMSSSV AFLSMCNHRE FVDAINKRFT QGQCWFSRGG QLFFVNPFNT VSSPRCNFYS 120
  121 VIPTITSSLF EAKSSTLFLR GVSGSGKSHV AELICMDIVK RLDNQGQLSH LFKISITILR 180
  181 PFLTANNAYN NQCSKAVLHY MFQTKENRLH RISLKHFPIE SMSRGCRANI FAIVANDLTE 240
  241 TEKEKYRIAG FRLRETTFNY GNFEEIKAAM SIIGIDMADI LKIISACILL NNINFKTDNT 300
  301 SSEVDNIADL EDASSLLGVS ALTMYRFMVS DALIDSRLIR DNLVTALYAR TVKYILDKIN 360
  361 LLLDAGSDPY DRGSVVTDSG ISVGTINESN HTVHIVDIPG YVRSTQNSLN ELIVNAANDI 420
  421 VQCTDSDMVN LFDFRTCTFP FAVNLFQQDI ESMIVDNNYA PSAINWPNNG KTVIQNVIES 480
  481 IRMLKKDIAD NNSQQIICLK SNDSLEYARV HENGLGYQLN LYRSVMASSC TSSNRINGIC 540
  541 ARSPTNSTPK VFFQRQYAIR EGRKHYFPQR RSVVIDFQDP SSGVILRAGE IVKAIGFSGE 600
  601 CYLVENGRRA RAAIPISFTE KSVVVAHNMN N

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 144.0
Match: 1g8xA
Description: Genetically engineered molecular motor
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle