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View Structure Prediction Details

Protein: glb-14
Organism: Caenorhabditis elegans
Length: 236 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for glb-14.

Description E-value Query
Range
Subject
Range
gi|9256890 - gi|9256890|pdb|1C7D|A Chain A, Deoxy Rhb1.2 (Recombinant Hemoglobin)
175.0 [0..6] [230..76]

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Predicted Domain #1
Region A:
Residues: [1-236]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRQLIEQHI EEVNVQRDAR PQNSLKEPTI IEHKEQKKSS EKPVTIIVEK PAKVAEKPKT  60
   61 TSSEKENAVP VDPLARKIID ETSRLSDRQR DVLQKTFAPI LQDCVRNGLK IFVRLFSEYP 120
  121 RYKLIWPQFR AIPDSSLMNA VELRRHASVY LNGLGKIIDS MRDEEALGKS MSRIAVAHIK 180
  181 WNVQRNHVIH MIEPVLEVVK ECNGYQLDDE TRQAWTVLYQ VIADLIEVFR CRALND

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 44.045757
Match: 1c7dA
Description: Hemoglobin, alpha-chain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle