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View Structure Prediction Details

Protein: rfl-1
Organism: Caenorhabditis elegans
Length: 430 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for rfl-1.

Description E-value Query
Range
Subject
Range
gi|50795135 - gi|50795135|ref|XP_423750.1| PREDICTED: similar to ubiquitin-activating enzyme E1C isoform 1; Nedd8-...
379.0 [0..11] [429..86]

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Predicted Domain #1
Region A:
Residues: [1-430]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSVDPLATE RWRSIRRLTD RDSAYKVPWF VPGPENFEAL QNTKILVIGA GGLGCELLKN  60
   61 LALSGFRTIE VIDMDTIDVS NLNRQFLFRE SDVGKSKAEV AAAFVQQRVV GCQVTAHNCR 120
  121 IEDKGQEFYR KFSIIICGLD SIPARRWING MLCDLVLEMA DGKPDENTII PMIDGGTEGF 180
  181 KGNARVIYPK FTACIDCTLD LYPPQVNFPL CTIAHTPRLP EHCIEYIKVV VWPEEKPFEG 240
  241 VSLDADDPIH VEWVLERASL RAEKYNIRGV DRRLTSGVLK RIIPAVASTN AVIAASCALE 300
  301 ALKLATNIAK PIDNYLNFTQ IHGAYTSVVS MMKDDNCLTC SGGRLPFEVS PSSTLESLII 360
  361 RLSERFHLKH PTLATSTRKL YCISSFMPQF EQESKENLHT SMKDLVSDGE EILVSDEALS 420
  421 RALTLRIQLI 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 103.0
Match: 2nvuB
Description: No description for 2nvuB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle