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View Structure Prediction Details

Protein: CE34511
Organism: Caenorhabditis elegans
Length: 381 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34511.

Description E-value Query
Range
Subject
Range
CE19136 - status:Partially_confirmed UniProt:Q9XX13 protein_id:CAA21028.1
199.0 [0..7] [376..3]

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Predicted Domain #1
Region A:
Residues: [1-381]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFFAALFWM FSLVRRLFGK KKPFKLLNLP YLAFAKVLNG MKVNEAVNLS QTSIKCEIKM  60
   61 KRVKKRIYKI IIENLDDCEE IDEENTEIKH LQRIILVNKK CDVIDAYNYM KNCKKYTRRV 120
  121 FAGYSVNFWI SKFCQIYKGK SSFTEISYLN LEDLIHLLQH FHELFAFDHV NLVMDHGRLF 180
  181 GDYQEVVKHI LFRKCHYVEI CGRKSRLTTE NMQYLMNNID LKYGLLIRCW HPSGFDKELL 240
  241 SGIPRLDIFY AQNYELEDVK NIFRFCEVIH LHIHAFTAKC IKQFILHWLA GHVPNLRRFR 300
  301 FVCFCYPEVV DYILNEIQHF KWDANRRAEI FIDGLEKINC GAGYDIERDD GLLATLICIG 360
  361 KEVEFLVWHD RFPNDLTQRS H

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.12
Match: 1fqvA
Description: Skp2; Cyclin A/CDK2-associated p19, Skp2
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle