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View Structure Prediction Details

Protein: CE34433
Organism: Caenorhabditis elegans
Length: 304 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE34433.

Description E-value Query
Range
Subject
Range
gi|109497489 - gi|109497489|ref|XP_001080376.1| PREDICTED: similar to Glycolipid transfer protein (GLTP) [Rattus no...
238.0 [0..103] [302..140]

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Predicted Domain #1
Region A:
Residues: [1-96]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPILSKNLEF LAYSMKKTEK IRIFWRFFEK NRISCIFQEN PRISQHFFVE TVNCSVFSEK  60
   61 KSKIFGIFHR KTEFFLAFFE KKLNFSWKNT KILIKN

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.05
Match: 2r2oA
Description: No description for 2r2oA was found.

Predicted Domain #2
Region A:
Residues: [97-304]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PNFSEFFGEN PFLWEKHEFF EKKIQFSIQI SNFSAFLGAT FSLVRKDIQG NVDKVRVRFE  60
   61 KDQEGQKYLQ QLIDADLAEH GGKFGIATEG LLWLKRGLQF MLELLTEMVT AYNSGLPRDK 120
  121 TEDLSGAVAT AYGKSLKRHH GFIAKQAFKV VTMAVPYRRQ ILKAVALGQE GLDDVCIHHI 180
  181 QCHLDNFRLN VKTLVDYYIE KKLDTPDV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.0
Match: 1tfjA
Description: Crystal structure of Bovine Glycolipid transfer protein in complex with a fatty acid
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle