| Protein: | nhr-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 312 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nhr-1.
| Description | E-value | Query Range |
Subject Range |
|
|
236.0 | [0..4] | [311..383] |
|
Region A: Residues: [1-162] |
1 11 21 31 41 51
| | | | | |
1 MNGTLADQLQ SHLANYGQPM VNSQRNEDPS MYMNGSAASV SHTNGSSSMG NDQKFPSYKR 60
61 MAQRRKVPEG ELCAVCSDLA TGYHYGVASC NGCKTFFRRT IVSEQTFICQ YNGNCDVNKN 120
121 IRCACRHCRF NKCLLVGMDA KAIQNDRDRI GPTKKIKMSS GS
|
| Detection Method: |  |
| Confidence: | 25.39794 |
| Match: | 2a66A |
| Description: | Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [163-312] |
1 11 21 31 41 51
| | | | | |
1 DDEQATTPHR LQDQEIIDQL TQVEGLCQEL RRCIIPEVTG VTHALTSPCL LFETTDLKVD 60
61 VSLTNTIFKE LFPASMNDIR MWNIREMRIC IEWAKTFDVY QRLNLFDQVG TRNFGCWGIE 120
121 VFILPKNYAV GKLGKSEVVF SQKILEQLQF
|
| Detection Method: | |
| Confidence: | 19.39794 |
| Match: | 2h77A |
| Description: | No description for 2h77A was found. |
